RetrogeneDB ID: | retro_itri_1791 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393786.1:376444..376747(-) | ||
Located in intron of: | ENSSTOG00000023420 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000010902 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 88.12 % |
Parental protein coverage: | 80.8 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | YTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNE |
YTI.IHK.IHGVGFK.RAPRAL.EI.KFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPY.IRVRLSRK.N. | |
Retrocopy | YTIYIHKCIHGVGFKRRAPRAL*EIQKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYGIRVRLSRKYNV |
Parental | DEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
DEDSPNKL.TLVTYVPVTTFKNLQ.VN..EN | |
Retrocopy | DEDSPNKLCTLVTYVPVTTFKNLQSVNMGEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |