RetrogeneDB ID: | retro_tsyr_754 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_189317:768..1067(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTSYG00000005427 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 56.86 % |
Parental protein coverage: | 80.8 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | APAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKA |
APA.K.GE.K.GRS.IN.VVT.E.TINIH...HG.GFKK.A...L.EI...AMK...T..V.I..R..KA | |
Retrocopy | APAEKHGEEK-GRSTINKVVTQEGTINIHGHAHGTGFKK*ASCVLREIWESAMKDVRTSNVCISARRDKA |
Parental | VWAK-GIRNVPYRIRVRLSRKRNEDEDSPNKL |
VWAK..I..V........SRK.NEDEDS.NKL | |
Retrocopy | VWAK<RIKDVLHIVHEQSSRKCNEDEDS*NKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |