Parental gene:

RPL21, ENSSARG00000013129

Aliases:None
Description:ribosomal protein L21 [Source:HGNC Symbol;Acc:10313]
Organism:Shrew (Sorex araneus)
Coordinates:GeneScaffold_2447:19555..24536(+)


>ENSSARG00000013129
GTTGTTCCTTTGGCCACATACATGCGTATATACAAGAAAGGTGATATTGTAGACATAAAGGGAATGGGCACAGTCCAAAA
AGGAATGCCCCACAAGTGTTATCATGGCAAAACTGGAAGAGTCTACAATGTTACCCAGCATGCTGTTGGCATTGTCGTTA
ACAAACAAGTCAAGGGCAAGATTCTTGCCAAGAGAATTCATGCTCCTAGGGAGAACATTAAGCACTCTGAGAATGACAAC
CTCCTGCAGGTGAAGGAAAATGATCAGAGAAAGAAAGAAGCCAAAGAGAAAGGGACTTGGGTTCGATTGGAGCGCCAGCC
CACTTCCCTCAGAGAAACGCACTTTGTGAGAACCAGTGGGAAGGAGCCTGATCAGCTGGAAGCCAGTCCCGAATTCATGT
CATGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000001648 possible_ortholog 5 retrogenes
retro_btau_1383, retro_btau_194, retro_btau_209, retro_btau_93, retro_btau_976,
Choloepus hoffmanni ENSCHOG00000007867 ortholog_one2one 6 retrogenes
retro_chof_1472, retro_chof_1596, retro_chof_2421, retro_chof_2454, retro_chof_266, retro_chof_572,
Latimeria chalumnae ENSLACG00000012678 ortholog_one2one 1 retrogene
retro_lcha_32,
Loxodonta africana ENSLAFG00000003677 possible_ortholog 11 retrogenes
retro_lafr_1167, retro_lafr_308, retro_lafr_331, retro_lafr_583, retro_lafr_63, retro_lafr_652, retro_lafr_738, retro_lafr_740, retro_lafr_856, retro_lafr_89, retro_lafr_97,
Myotis lucifugus ENSMLUG00000010093 possible_ortholog 46 retrogenes
retro_mluc_1066, retro_mluc_1079, retro_mluc_1138, retro_mluc_1164, retro_mluc_1171, retro_mluc_1219, retro_mluc_1274, retro_mluc_1279, retro_mluc_1307, retro_mluc_1323, retro_mluc_1379, retro_mluc_1382, retro_mluc_1409, retro_mluc_1413, retro_mluc_1469, retro_mluc_1481, retro_mluc_1525, retro_mluc_162, retro_mluc_1647, retro_mluc_1753, retro_mluc_1803, retro_mluc_1849, retro_mluc_1862, retro_mluc_1929, retro_mluc_1969, retro_mluc_1981, retro_mluc_2044, retro_mluc_2077, retro_mluc_2109, retro_mluc_2121, retro_mluc_2212, retro_mluc_230, retro_mluc_2335, retro_mluc_2338, retro_mluc_2436, retro_mluc_2592, retro_mluc_27, retro_mluc_279, retro_mluc_360, retro_mluc_503, retro_mluc_554, retro_mluc_620, retro_mluc_631, retro_mluc_806, retro_mluc_961, retro_mluc_97,
Macaca mulatta ENSMMUG00000029574 possible_ortholog 2 retrogenes
retro_mmul_1289, retro_mmul_219,
Mus musculus ENSMUSG00000041453 possible_ortholog 101 retrogenes
retro_mmus_1012, retro_mmus_1046, retro_mmus_1057, retro_mmus_1083, retro_mmus_1123, retro_mmus_1199, retro_mmus_1287, retro_mmus_1354, retro_mmus_1461, retro_mmus_1475, retro_mmus_1529, retro_mmus_1561, retro_mmus_1572, retro_mmus_1596, retro_mmus_1617, retro_mmus_1641, retro_mmus_1644, retro_mmus_17, retro_mmus_1714, retro_mmus_1739, retro_mmus_1762, retro_mmus_1797, retro_mmus_1848, retro_mmus_1860, retro_mmus_1862, retro_mmus_1875, retro_mmus_1897, retro_mmus_1915, retro_mmus_1931, retro_mmus_1936, retro_mmus_1994, retro_mmus_2042, retro_mmus_2049, retro_mmus_2101, retro_mmus_2130, retro_mmus_2176, retro_mmus_2179, retro_mmus_2185, retro_mmus_2214, retro_mmus_2233, retro_mmus_2237, retro_mmus_2238, retro_mmus_2279, retro_mmus_2309, retro_mmus_2312, retro_mmus_2335, retro_mmus_2344, retro_mmus_2395, retro_mmus_2447, retro_mmus_2517, retro_mmus_2567, retro_mmus_2585, retro_mmus_2598, retro_mmus_266, retro_mmus_2662, retro_mmus_2698, retro_mmus_2707, retro_mmus_2778, retro_mmus_2808, retro_mmus_2853, retro_mmus_2874, retro_mmus_2945, retro_mmus_2980, retro_mmus_3035, retro_mmus_3055, retro_mmus_3085, retro_mmus_3103, retro_mmus_3112, retro_mmus_3220, retro_mmus_3252, retro_mmus_3261, retro_mmus_3295, retro_mmus_3318, retro_mmus_3328, retro_mmus_333, retro_mmus_3341, retro_mmus_3446, retro_mmus_3545, retro_mmus_3581, retro_mmus_3712, retro_mmus_397, retro_mmus_400, retro_mmus_401, retro_mmus_598, retro_mmus_601, retro_mmus_606, retro_mmus_663, retro_mmus_734, retro_mmus_735, retro_mmus_758, retro_mmus_782, retro_mmus_806, retro_mmus_835, retro_mmus_862, retro_mmus_883, retro_mmus_918, retro_mmus_932, retro_mmus_940, retro_mmus_957, retro_mmus_993, retro_mmus_998,
Rattus norvegicus ENSRNOG00000000957 possible_ortholog 13 retrogenes
retro_rnor_227, retro_rnor_298, retro_rnor_319, retro_rnor_329, retro_rnor_330, retro_rnor_333, retro_rnor_365, retro_rnor_366, retro_rnor_416, retro_rnor_5, retro_rnor_79, retro_rnor_81, retro_rnor_82,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sara_44 78.83 100.00
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2. retro_sara_46 69.57 100.00
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3. retro_sara_48 69.34 100.00
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4. retro_sara_50 76.52 97.01
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5. retro_sara_98 77.54 100.00
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6. retro_sara_107 63.79 83.58
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7. retro_sara_112 61.43 100.00
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8. retro_sara_120 65.14 79.85
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9. retro_sara_129 67.15 99.25
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10. retro_sara_133 77.37 100.00
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11. retro_sara_138 79.56 100.00
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12. retro_sara_140 78.79 97.01
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13. retro_sara_155 52.05 53.73
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14. retro_sara_159 60.77 96.27
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15. retro_sara_170 57.02 87.31
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16. retro_sara_187 60.91 79.85
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17. retro_sara_191 53.85 57.46
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18. retro_sara_193 75.36 100.00
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19. retro_sara_206 72.79 99.25
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20. retro_sara_210 74.81 95.52
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21. retro_sara_226 71.74 100.00
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22. retro_sara_252 74.82 100.00
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23. retro_sara_261 72.54 100.00
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24. retro_sara_286 64.23 100.00
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25. retro_sara_301 76.64 100.00
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26. retro_sara_317 80.30 97.01
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27. retro_sara_343 57.55 76.87
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28. retro_sara_350 79.56 100.00
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29. retro_sara_386 80.29 100.00
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30. retro_sara_406 80.85 67.16
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31. retro_sara_426 74.82 100.00
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32. retro_sara_480 78.10 100.00
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33. retro_sara_485 83.33 58.21
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34. retro_sara_500 78.36 97.01
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35. retro_sara_502 78.10 100.00
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36. retro_sara_513 86.49 55.22
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37. retro_sara_519 75.94 97.01
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38. retro_sara_520 85.90 58.21
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39. retro_sara_562 74.45 100.00
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40. retro_sara_619 78.83 100.00
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41. retro_sara_622 55.36 79.85
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42. retro_sara_642 59.09 64.18
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43. retro_sara_649 72.06 100.00
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44. retro_sara_652 88.46 58.21
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45. retro_sara_673 72.73 73.13
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46. retro_sara_674 61.62 72.39
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47. retro_sara_677 79.55 97.01
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48. retro_sara_698 61.17 74.63
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49. retro_sara_720 78.65 64.93
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50. retro_sara_729 71.72 72.39
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51. retro_sara_754 74.26 99.25
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Download FASTA sequences of all ENSSARG00000013129 retrocopies