RetrogeneDB ID: | retro_sara_642 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_250620:4062..4323(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL21 | ||
Ensembl ID: | ENSSARG00000013129 | ||
Aliases: | None | ||
Description: | ribosomal protein L21 [Source:HGNC Symbol;Acc:10313] |
Percent Identity: | 59.09 % |
Parental protein coverage: | 64.18 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | VVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRIHAPR |
VV.L.T...IYKKGD.VDI.GMG..Q.G..HK..H.KTGRVY..TQHA.GI.VNKQ.KGK.LAK.I.... | |
Retrocopy | VVTLITSKQIYKKGDTVDINGMGAAQQGKSHKHSHHKTGRVYHITQHALGIKVNKQLKGKSLAK*I-SVH |
Parental | ENIKHSEN--DNLLQVKE |
.N..HS.N....L..VKE | |
Retrocopy | INMRHSKN*EGFLMRVKE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |