RetrogeneDB ID: | retro_sara_210 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | GeneScaffold_7229:140340..140733(+) | ||
Located in intron of: | ENSSARG00000006004 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL21 | ||
Ensembl ID: | ENSSARG00000013129 | ||
Aliases: | None | ||
Description: | ribosomal protein L21 [Source:HGNC Symbol;Acc:10313] |
Percent Identity: | 74.81 % |
Parental protein coverage: | 95.52 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | YMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRIHAPRENIKH- |
Y.RIYKKGDIVDIKGMGTVQKG.PHKCYHGKTGRVYNVTQHAVGIVVNK.VKGK.LAKRI....E..KH. | |
Retrocopy | YIRIYKKGDIVDIKGMGTVQKGIPHKCYHGKTGRVYNVTQHAVGIVVNKLVKGKVLAKRINVRIEHTKHS |
Parental | -SENDNLLQVKENDQRKKEAKEKGTWVRLERQPTSLRETHFVRTSGKEPDQLEASP-EFMS |
.S....L..VKENDQ.KKEAKEKGTWV.L..QP...RE.HFVRT.GKEP...EA.P.EFM. | |
Retrocopy | KSQDSSLKRVKENDQKKKEAKEKGTWVQLKHQPAPPREAHFVRTNGKEPELMEAIPYEFMA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |