RetrogeneDB ID: | retro_sara_206 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | GeneScaffold_7113:7824..8232(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL21 | ||
Ensembl ID: | ENSSARG00000013129 | ||
Aliases: | None | ||
Description: | ribosomal protein L21 [Source:HGNC Symbol;Acc:10313] |
Percent Identity: | 72.79 % |
Parental protein coverage: | 99.25 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | VVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRIHAPR |
VVPLATY.RIYKKGDIVDIKGMGT.QKGM.HK.YHGKTGRVYNVTQHAVGIVVN.QVKGKIL.KRI.... | |
Retrocopy | VVPLATYTRIYKKGDIVDIKGMGTIQKGMLHKYYHGKTGRVYNVTQHAVGIVVN*QVKGKILSKRINVRT |
Parental | ENIKHSENDN--LLQVKENDQRKKEAKEKGTWVRLERQPTSLRETHFVRTSGKEPDQLEASP-EFM |
..IKHS......L..VK.NDQ.KKEAKEKGTW..L..QP...RE.HF.RT.GKEP..LE..P.EFM | |
Retrocopy | DRIKHSKSQDSFLKRVKGNDQKKKEAKEKGTWLHLKHQPAPPREAHFGRTNGKEPEWLEPIPCEFM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |