RetrogeneDB ID: | retro_sara_720 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_28675:846..1113(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL21 | ||
Ensembl ID: | ENSSARG00000013129 | ||
Aliases: | None | ||
Description: | ribosomal protein L21 [Source:HGNC Symbol;Acc:10313] |
Percent Identity: | 78.65 % |
Parental protein coverage: | 64.93 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | VVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRIHAPR |
VVPLATYM.IYKKGDI.DIKGMG.VQKGMPHKCYHGKTGRVYNVTQHA.GI.VNKQVK.KILAKRI.... | |
Retrocopy | VVPLATYMHIYKKGDIIDIKGMGRVQKGMPHKCYHGKTGRVYNVTQHALGIIVNKQVKSKILAKRINVCI |
Parental | ENIKHSEN-DNLLQ-VKEN |
..IKHS...D..L..VKEN | |
Retrocopy | KHIKHSKS*DSFLK*VKEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |