RetrogeneDB ID: | retro_sara_191 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | GeneScaffold_657:404404..404627(-) | ||
Located in intron of: | ENSSARG00000007855 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL21 | ||
Ensembl ID: | ENSSARG00000013129 | ||
Aliases: | None | ||
Description: | ribosomal protein L21 [Source:HGNC Symbol;Acc:10313] |
Percent Identity: | 53.85 % |
Parental protein coverage: | 57.46 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | VPLATYMRIYKKGDIVDIKGMG-TVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRIHAPR |
VPL.TYM.IY..G.I.D.K..G.TVQK...HKC.HGKT.RV..V.QHAVGIV..K..K....AKR..... | |
Retrocopy | VPLVTYMQIYMAGYILD*KETG>TVQKRC-HKCFHGKTERVHSVSQHAVGIV-EKNFK-XXXAKRTNVYF |
Parental | ENIKHSEN |
..IK.S.. | |
Retrocopy | QHIKQSKS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |