RetrogeneDB ID: | retro_sara_673 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_256547:77647..77940(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL21 | ||
Ensembl ID: | ENSSARG00000013129 | ||
Aliases: | None | ||
Description: | ribosomal protein L21 [Source:HGNC Symbol;Acc:10313] |
Percent Identity: | 72.73 % |
Parental protein coverage: | 73.13 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | VVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRIHAPR |
VVPLATYM.IYKKGDIVDIKGMGTVQKGMPH.C.HGKTGRVYNVT.HAVGIVVNKQVKGKILAKRI.... | |
Retrocopy | VVPLATYMCIYKKGDIVDIKGMGTVQKGMPHICSHGKTGRVYNVTRHAVGIVVNKQVKGKILAKRINGRI |
Parental | ENIKHSENDNLLQVKENDQ-RKKEAKEKG |
E.IKHS..............RK...KE.G | |
Retrocopy | EHIKHSKSRDSFLKRVKQE<RKLKRKELG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |