RetrogeneDB ID: | retro_sara_698 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_259854:24001..24304(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL21 | ||
Ensembl ID: | ENSSARG00000013129 | ||
Aliases: | None | ||
Description: | ribosomal protein L21 [Source:HGNC Symbol;Acc:10313] |
Percent Identity: | 61.17 % |
Parental protein coverage: | 74.63 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | VVPLATYMRIYKKGDIVDIKGMGTVQKG-MPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRIHAP |
VVPL.TYMRIY.K.DI.DI..MGT.Q.....HK..HGKTGRV..VTQHAV.I..N...KGKILAKR.... | |
Retrocopy | VVPLTTYMRIYRKRDIGDIRRMGTDQRAYLVHKYHHGKTGRVCSVTQHAVDI--NTTNKGKILAKRTQVH |
Parental | RENIKHSEN-DNLLQ-VKENDQRKKEAKEKGTW |
.E.IKHS...D..L..V.ENDQ.KKE...KGTW | |
Retrocopy | IEHIKHSKSQDSFLKCVEENDQKKKEGEKKGTW |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |