RetrogeneDB ID: | retro_sara_729 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_38799:588..885(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL21 | ||
Ensembl ID: | ENSSARG00000013129 | ||
Aliases: | None | ||
Description: | ribosomal protein L21 [Source:HGNC Symbol;Acc:10313] |
Percent Identity: | 71.72 % |
Parental protein coverage: | 72.39 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | VVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRIHAPR |
VVPLATY.RI.KKGDIV.IKGMGTVQKGMPHKCYHGKT.RV..VTQHA.GIVVNK.VKGKILAKRI.... | |
Retrocopy | VVPLATYVRICKKGDIVGIKGMGTVQKGMPHKCYHGKTVRVHDVTQHAIGIVVNKRVKGKILAKRINVRI |
Parental | ENIKHSENDN--LLQVKENDQRKKEAKEK |
E.IKHS......L..VKEND....E...K | |
Retrocopy | EHIKHSKSRDSFLKRVKENDXXXXEGSQK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |