RetrogeneDB ID: | retro_sara_520 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_230082:29397..29631(-) | ||
Located in intron of: | ENSSARG00000012710 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL21 | ||
Ensembl ID: | ENSSARG00000013129 | ||
Aliases: | None | ||
Description: | ribosomal protein L21 [Source:HGNC Symbol;Acc:10313] |
Percent Identity: | 85.9 % |
Parental protein coverage: | 58.21 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | VVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRIHAPR |
VVPLATYM.IYKKGDIVDIKGMGT.QKGMPHKCYHGKTGRVYNVTQHAVGIV.NKQVK.KILAKRI.... | |
Retrocopy | VVPLATYMHIYKKGDIVDIKGMGTLQKGMPHKCYHGKTGRVYNVTQHAVGIVINKQVKVKILAKRINVHM |
Parental | ENIKHSEN |
E.IKHS.. | |
Retrocopy | EYIKHSKS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |