RetrogeneDB ID: | retro_mputfur_1002 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896992.1:3610461..3610894(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FCF1 | ||
Ensembl ID: | ENSMPUG00000009321 | ||
Aliases: | None | ||
Description: | FCF1 rRNA-processing protein [Source:HGNC Symbol;Acc:20220] |
Percent Identity: | 74.83 % |
Parental protein coverage: | 73.23 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | KEKKDPSALKEREVPQHPSCLFFQYNTQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITD |
KE.K.PSALKERE.PQHPSCL.FQ.NTQL.PP.HIL..TNFINFSI.A.LDLVQ.MMD.L.AKCIP.ITD | |
Retrocopy | KERKYPSALKEREDPQHPSCLLFQDNTQLDPP*HILTETNFINFSIQARLDLVQLMMDYLFAKCIP*ITD |
Parental | CVMAEIEKLGQKYRVALRIAKDPRFERLPC-THKGTYADDCLVQRVTQHKCY-IVATVDRDLKRRIRKIP |
..M..IE.L.QKY.VALRIAKDPRFER.P...HKGTYADD.LVQRVTQHKCY...AT...DLKRR..KIP | |
Retrocopy | FTMVKIEELEQKYPVALRIAKDPRFER*PS<PHKGTYADDSLVQRVTQHKCY<YLATTSLDLKRRMGKIP |
Parental | GVPIMYI |
.VPI.YI | |
Retrocopy | RVPIIYI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |