RetrogeneDB ID: | retro_mputfur_1621 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897386.1:228737..229172(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FCF1 | ||
Ensembl ID: | ENSMPUG00000009321 | ||
Aliases: | None | ||
Description: | FCF1 rRNA-processing protein [Source:HGNC Symbol;Acc:20220] |
Percent Identity: | 65.31 % |
Parental protein coverage: | 74.24 % |
Number of stop codons detected: | 6 |
Number of frameshifts detected | 0 |
Parental | GKQKKARKYATMKRMLSLRDQRLKEKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPPYHILV |
GKQ.KARKY.T.K.ML......L.EKDRLKP.........ALKEREVP.HPS..FF.Y....G.PYHILV | |
Retrocopy | GKQEKARKYVTCK*MLT-SEILLREKDRLKPXXXXXXXSRALKEREVPLHPS*-FF*YKHTAGSPYHILV |
Parental | DTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKDPRFERLPCTHKGTYA |
.T.FINFSI.AKLD.VQSMMD.L.AKC..C.TDCVMAE.EK.G.KY.VALRIAK.PRF..LP.THK..YA | |
Retrocopy | GTDFINFSI*AKLDRVQSMMDRLCAKCTSCTTDCVMAETEKPG*KYQVALRIAKEPRFK*LPRTHKTNYA |
Parental | DDCLVQR |
DDC.V.. | |
Retrocopy | DDCSVRK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |