RetrogeneDB ID: | retro_nleu_874 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397275.1:33625906..33626472(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FCF1 | ||
Ensembl ID: | ENSNLEG00000016311 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 81.58 % |
Parental protein coverage: | 95.94 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | YATMKRMLSLRDQRLKEKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPPYHILVDTNFINFS |
.ATMKRMLSLRDQR...............DPS.LKEREVPQHPSCLFFQYNTQLGPPYHILVDTNFINFS | |
Retrocopy | HATMKRMLSLRDQRXXXXXXXXXXXXXXXDPSTLKEREVPQHPSCLFFQYNTQLGPPYHILVDTNFINFS |
Parental | IKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVQR- |
IKAKLDLVQS.MDCLYAKCIPCITDCVMAEIE.LGQKY.VALRI.KDPRFE.LPCTH.GTYADDCLVQ.. | |
Retrocopy | IKAKLDLVQSVMDCLYAKCIPCITDCVMAEIEILGQKYQVALRITKDPRFELLPCTHQGTYADDCLVQK< |
Parental | VTQHKCYIVATVDRDLKRRIRKIPGVPIMYISNHRYNIERMPDDYGAPRF |
.TQ.KCYI.ATVD.DLKR.I.KIPGVPIMYISNHRYN.E.M.DDYGAP.F | |
Retrocopy | ITQRKCYIMATVDWDLKRKICKIPGVPIMYISNHRYNTEWMSDDYGAP*F |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |