RetrogeneDB ID: | retro_mputfur_1315 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897078.1:1616415..1616877(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FCF1 | ||
Ensembl ID: | ENSMPUG00000009321 | ||
Aliases: | None | ||
Description: | FCF1 rRNA-processing protein [Source:HGNC Symbol;Acc:20220] |
Percent Identity: | 86.71 % |
Parental protein coverage: | 79.8 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | SALKEREVPQHPSCLFFQYNTQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEI |
.ALKE..VPQHPSCLFFQY.TQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLY.KCI.CITDCVMAEI | |
Retrocopy | NALKEKDVPQHPSCLFFQYYTQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYTKCILCITDCVMAEI |
Parental | EKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYIS |
EKLGQKY.VAL.I.KD.RFERLPCTHKGTYADDCLVQRVTQHKCYIVATV.RDLK.RI.KI.GVPIMYIS | |
Retrocopy | EKLGQKY*VALKINKDLRFERLPCTHKGTYADDCLVQRVTQHKCYIVATVHRDLKGRIQKIAGVPIMYIS |
Parental | NHRYNIERMPDDYGAPRF |
NH.YNI.....DYGA.RF | |
Retrocopy | NHSYNID----DYGALRF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |