RetrogeneDB ID: | retro_ttru_584 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_2773:97808..98190(+) | ||
Located in intron of: | ENSTTRG00000014545 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FCF1 | ||
Ensembl ID: | ENSTTRG00000002440 | ||
Aliases: | None | ||
Description: | FCF1 rRNA-processing protein [Source:HGNC Symbol;Acc:20220] |
Percent Identity: | 52.71 % |
Parental protein coverage: | 64.65 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | HILVDTNFINFSIKAKLDLVQSMMDCLYAKCI-PCITDCVMAEIEKLGQKYRVALRIAKDPRFERLPCTH |
HI.VD.NFIN.SIK.KL...QS.M.C...KCI.P.....VM...EKLGQK..V.LRI....RFE..P.TH | |
Retrocopy | HIFVDSNFINSSIKVKLFSEQSKMIC-NDKCI>PYKANYVMSKFEKLGQKC*VTLRIVRERRFEGFPYTH |
Parental | KGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYISNHRYNIERMPDDYGA |
..T.A.DC..........Y...TV...LKRR..KI.GVPI.YIS.H.YN...MPDDY.A | |
Retrocopy | ERTHAADCINTKNI*KRHYNLVTVNLGLKRRLWKIAGVPITYISKHGYNMKMMPDDYRA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |