RetrogeneDB ID: | retro_nleu_1927 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397316.1:3700129..3700721(-) | ||
Located in intron of: | ENSNLEG00000008467 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FCF1 | ||
Ensembl ID: | ENSNLEG00000016311 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 80.81 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | GKQKKTRKYATMKRMLSLRDQRLKEKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPPYHILV |
GKQKKTRKYATMK.MLS.RDQRL...............PS.LKERE.PQHP.CLFFQYNTQLGPPYHIL. | |
Retrocopy | GKQKKTRKYATMK*MLSFRDQRLXXXXXXXXXXXXXXXPSVLKEREIPQHPTCLFFQYNTQLGPPYHILI |
Parental | DTN-FINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKDPRFERLPCTHKGTY |
DTN.FI.FSIKAK.DLVQSMMDCLY.KCIPCITDCVM.EIEKL.QKY.VAL.I.KDPRFE.LPCTH.GTY | |
Retrocopy | DTN>FIHFSIKAKPDLVQSMMDCLYTKCIPCITDCVMPEIEKLEQKYLVALWITKDPRFEGLPCTH*GTY |
Parental | ADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYISNHRYNIERMPDDYGAPRF |
ADDCLVQRV.QHKCYIVATVD.DLKRRI.KIPGVPIMY.SNHRYNIE.MPDDYGAP.F | |
Retrocopy | ADDCLVQRVIQHKCYIVATVDQDLKRRIPKIPGVPIMYTSNHRYNIE*MPDDYGAP*F |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |