RetrogeneDB ID: | retro_mputfur_532 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896918.1:15725035..15725445(+) | ||
Located in intron of: | ENSMPUG00000007639 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FCF1 | ||
Ensembl ID: | ENSMPUG00000009321 | ||
Aliases: | None | ||
Description: | FCF1 rRNA-processing protein [Source:HGNC Symbol;Acc:20220] |
Percent Identity: | 81.88 % |
Parental protein coverage: | 69.19 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | YNTQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKDPR |
YNTQLG.PYHILVDTNFINFSIK.KLDLVQSMMDCLYAKCIPCITDCVM.E.E.LGQKY.V.L...KDPR | |
Retrocopy | YNTQLGLPYHILVDTNFINFSIKVKLDLVQSMMDCLYAKCIPCITDCVMDETETLGQKY*VVLKTSKDPR |
Parental | FERLPCTHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYISN-HRYNIERMPDDYGA |
FE.LPCTHKG.YAD.CLVQR.T.HKCYIVATVD.DLK.RI.KIPGVPIMYISN.HRYN.E.M....GA | |
Retrocopy | FEWLPCTHKGIYADACLVQRGTEHKCYIVATVDQDLKGRIQKIPGVPIMYISN<HRYNVEQMLENNGA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |