RetrogeneDB ID: | retro_ogar_503 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873522.1:3794657..3795247(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000002711 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 82.83 % |
Parental protein coverage: | 99.49 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | GKQKKTRKYATMKRMLSLRDQRLKEKDRLKPKKKEKKDPSTLKEREVPQHPSCLFFQYNTQLGPPYHILV |
GKQKKTRKYATMK.MLS.RDQRL...............PSTLKEREVPQHPSCLFFQYNTQLGP..HILV | |
Retrocopy | GKQKKTRKYATMK*MLSPRDQRLXXXXXXXXXXXXXXXPSTLKEREVPQHPSCLFFQYNTQLGPLSHILV |
Parental | DTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKDPRFERLPCTHKGTYA |
DTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMA.IEKLGQKY.V.LRIAKDPRFER.PCTHKGTYA | |
Retrocopy | DTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMADIEKLGQKY*VVLRIAKDPRFERFPCTHKGTYA |
Parental | DDCLVQRVTQHKCY-IVATVDRDLKRRIRKIPGVPIMYISNHRYNIERMPDDYGAPRF |
DDC.VQRVTQHKCY..VATVD.DLK....KIPGVPIM.ISNHRYNI..MPDDYGAPRF | |
Retrocopy | DDCSVQRVTQHKCY<LVATVDLDLK**VWKIPGVPIMCISNHRYNIKQMPDDYGAPRF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |