Parental gene: | Ldhb, ENSMPUG00000000172 |
| Aliases: | None |
| Description: | lactate dehydrogenase B [Source:MGI Symbol;Acc:MGI:96763] |
| Organism: | Ferret (Mustela putorius furo) |
| Coordinates: | GL897063.1:217052..239628(+) |
>ENSMPUG00000000172
ATGGCAACTCTTAAGGAAAAACTGATTGCACCAGTTGCAGAAGAAGATGCAGCCGTTCCAAACAATAAGATTACTGTAGT
GGGTGTTGGACAAGTTGGTATGGCCTGTGCCATCAGCATTCTGGGAAAGTCCCTGGCTGATGAACTTGCCCTTGTGGATG
TTTTGGAAGATAAACTCAAAGGAGAAATGATGGATCTGCAGCATGGAAGCTTATTTCTTCAGACACCTAAAATAGTGGCA
GATAAAGATTACTCTGTGACTGCCAATTCTAAGATTGTGGTGGTGACTGCGGGAGTCCGCCAGCAGGAGGGAGAGAGCCG
GCTCAATCTGGTGCAGAGGAATGTTAATGTCTTCAAATTCATTATTCCGCAGATAGTCAAGTACAGTCCTGATTGTATCA
TAATTGTGGTTTCCAACCCAGTGGATATTCTCACATACGTTACCTGGAAACTAAGTGGACTACCCAAGCACCGGGTGATC
GGAAGTGGGTGTAATCTGGATTCTGCAAGATTTCGCTATCTTATGGCTGAAAAACTTGGCATTCATCCCAGCAGCTGCCA
TGGATGGATTTTGGGAGAACATGGTGATTCAAGTGTGGCTGTGTGGAGTGGAGTGAATGTGGCAGGCGTTTCTCTTCAGG
AACTGAATCCAGATATGGGAACAGACAACGACAGTGAAAATTGGAAGGAAGTGCATAAAATGGTGGTGGAAAGTGCCTAT
GAAGTCATCAAGCTAAAAGGATATACCAACTGGGCTATTGGATTAAGTGTGGCTGATCTCATTGAATCCATGTTGAAAAA
TCTATCCAGGATTCATCCAGTGTCAACAATGGTGAAGGGGATGTATGGCATTGAGAATGAAGTCTTCCTGAGCCTTCCTT
GTATCCTGAACGCTCGGGGCTTAACCAGTGTGATCAACCAGAAGCTGAAAGATGATGAAGTTGCTCAGCTCAAGAAAAGT
GCAGATACCTTGTGGGACATCCAGAAGGACCTAAAAGATCTGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000016175 | ortholog_one2one | 4 retrogenes | |
| Bos taurus | ENSBTAG00000019603 | possible_ortholog | 4 retrogenes | |
| Canis familiaris | ENSCAFG00000012195 | possible_ortholog | 9 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000007658 | possible_ortholog | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000007138 | possible_ortholog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000013620 | ortholog_one2one | 4 retrogenes | |
| Echinops telfairi | ENSETEG00000019955 | possible_ortholog | 1 retrogene | |
| Felis catus | ENSFCAG00000012639 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000111716 | possible_ortholog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000000972 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000004825 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012155 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000002679 | possible_ortholog | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000017786 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000013730 | within_species_paralog | 5 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000022015 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004763 | ortholog_one2one | 9 retrogenes | |
| Pongo abelii | ENSPPYG00000004356 | possible_ortholog | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000004762 | possible_ortholog | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000002462 | ortholog_one2one | 3 retrogenes | |
| Sorex araneus | ENSSARG00000002565 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000000576 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000022058 | possible_ortholog | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000013759 | possible_ortholog | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mputfur_492 | 70.18 | 97.31 | Please wait, loading  |
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| 2. | retro_mputfur_539 | 93.75 | 100.00 | Please wait, loading |
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| 3. | retro_mputfur_549 | 80.09 | 64.67 | Please wait, loading |
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| 4. | retro_mputfur_1300 | 78.98 | 93.41 | Please wait, loading |
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| 5. | retro_mputfur_1561 | 71.79 | 57.49 | Please wait, loading |
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Download FASTA sequences of all ENSMPUG00000000172 retrocopies