Parental gene: | ENSAMEG00000016175 |
| Aliases: | None |
| Description: | L-lactate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:D2I1F1] |
| Organism: | Panda (Ailuropoda melanoleuca) |
| Coordinates: | GL193990.1:183361..202358(+) |
>ENSAMEG00000016175
ATGGCAACTCTTAAGGAAAAACTGATTGCACCAGTTGCAGAAGAAGAGGCAGCCATCCCAAACAATAAGATCACTGTAGT
GGGTGTTGGACAAGTTGGTATGGCGTGTGCCATCAGCATTCTGGGAAAGTCTCTGGCTGACGAACTTGCGCTTGTGGATG
TTTTGGAAGATAAACTCAAAGGAGAAATGATGGATCTGCAACATGGGAGCTTATTTCTTCAGACACCTAAAATCGTGGCA
GATAAAGATTACTCTGTGACTGCCAATTCTAAGATTGTGGTGGTGACTGCCGGAGTCCGCCAACAGGAGGGAGAGAGCCG
CCTCAATCTGGTGCAGAGGAATGTTAATGTCTTCAAATTCATTATTCCGCAGATAGTCAAGTACAGTCCTGACTGCATCA
TAATTGTGGTTTCCAACCCAGTGGATATTCTCACATATGTTACCTGGAAACTAAGTGCACTACCCAAGCACCGTGTGATT
GGAAGTGGGTGTAATCTGGATTCTGCTAGATTTCGCTATCTTATGGCTGAAAAACTTGGCGTTCATCCCAGCAGCTGCCA
TGGATGGATTTTGGGAGAACATGGCGACTCAAGTGTGGCTGTGTGGAGTGGAGTGAACGTGGCAGGCGTTTCTCTTCAGG
AACTGAATCCAGAAATGGGAACAGACAATGACAGTGAAAATTGGAAGGAAGTGCATAAGATGGTGGTGGAAAGTGCCTAC
GAAGTCATCAAGCTAAAAGGATATACTAACTGGGCTATTGGATTGAGTGTGGCTGATCTCATTGAATCCATGTTGAAAAA
TCTATCCAGGATTCATCCAGTGTCAACAATGGTGAAGGGGATGTATGGCATTGAGAATGAAGTCTTCCTGAGCCTTCCGT
GTATCCTGAACGCTCGGGGCTTGACCAGTGTGATCAACCAGAAGCTGAAGGATGATGAGGTTGCCCAGCTCAAGAAAAGT
GCAGATACCTTGTGGGACATCCAGAAAGACCTAAAAGATCTCTGA
ATGGCAACTCTTAAGGAAAAACTGATTGCACCAGTTGCAGAAGAAGAGGCAGCCATCCCAAACAATAAGATCACTGTAGT
GGGTGTTGGACAAGTTGGTATGGCGTGTGCCATCAGCATTCTGGGAAAGTCTCTGGCTGACGAACTTGCGCTTGTGGATG
TTTTGGAAGATAAACTCAAAGGAGAAATGATGGATCTGCAACATGGGAGCTTATTTCTTCAGACACCTAAAATCGTGGCA
GATAAAGATTACTCTGTGACTGCCAATTCTAAGATTGTGGTGGTGACTGCCGGAGTCCGCCAACAGGAGGGAGAGAGCCG
CCTCAATCTGGTGCAGAGGAATGTTAATGTCTTCAAATTCATTATTCCGCAGATAGTCAAGTACAGTCCTGACTGCATCA
TAATTGTGGTTTCCAACCCAGTGGATATTCTCACATATGTTACCTGGAAACTAAGTGCACTACCCAAGCACCGTGTGATT
GGAAGTGGGTGTAATCTGGATTCTGCTAGATTTCGCTATCTTATGGCTGAAAAACTTGGCGTTCATCCCAGCAGCTGCCA
TGGATGGATTTTGGGAGAACATGGCGACTCAAGTGTGGCTGTGTGGAGTGGAGTGAACGTGGCAGGCGTTTCTCTTCAGG
AACTGAATCCAGAAATGGGAACAGACAATGACAGTGAAAATTGGAAGGAAGTGCATAAGATGGTGGTGGAAAGTGCCTAC
GAAGTCATCAAGCTAAAAGGATATACTAACTGGGCTATTGGATTGAGTGTGGCTGATCTCATTGAATCCATGTTGAAAAA
TCTATCCAGGATTCATCCAGTGTCAACAATGGTGAAGGGGATGTATGGCATTGAGAATGAAGTCTTCCTGAGCCTTCCGT
GTATCCTGAACGCTCGGGGCTTGACCAGTGTGATCAACCAGAAGCTGAAGGATGATGAGGTTGCCCAGCTCAAGAAAAGT
GCAGATACCTTGTGGGACATCCAGAAAGACCTAAAAGATCTCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017854 | within_species_paralog | 2 retrogenes | |
| Bos taurus | ENSBTAG00000019603 | possible_ortholog | 4 retrogenes | |
| Canis familiaris | ENSCAFG00000012195 | possible_ortholog | 9 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000007658 | possible_ortholog | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000007138 | possible_ortholog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000013620 | ortholog_one2many | 4 retrogenes | |
| Echinops telfairi | ENSETEG00000019955 | possible_ortholog | 1 retrogene | |
| Felis catus | ENSFCAG00000012639 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000111716 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015758 | possible_ortholog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000000972 | ortholog_one2many | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000004825 | ortholog_one2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000017183 | possible_ortholog | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000012155 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000002679 | possible_ortholog | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000017786 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000000172 | ortholog_one2one | 5 retrogenes | |
| Mus musculus | ENSMUSG00000030246 | possible_ortholog | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000022015 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004763 | ortholog_one2many | 9 retrogenes | |
| Pongo abelii | ENSPPYG00000004356 | possible_ortholog | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000004762 | possible_ortholog | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000002462 | ortholog_one2many | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000013000 | possible_ortholog | 3 retrogenes | |
| Sorex araneus | ENSSARG00000002565 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000000576 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000022058 | possible_ortholog | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000013759 | possible_ortholog | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_amel_814 | 72.69 | 79.64 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_amel_882 | 73.12 | 54.49 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_amel_977 | 79.33 | 53.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_amel_1316 | 83.49 | 97.60 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSAMEG00000016175 retrocopies