RetrogeneDB ID: | retro_amel_1265 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193127.1:824950..825244(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5H | ||
Ensembl ID: | ENSAMEG00000009115 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d [Source:HGNC Symbol;Acc:845] |
Percent Identity: | 88.78 % |
Parental protein coverage: | 60.87 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | AGLVDDFEKKFNALKVPVPEDKYTVQVDAEEKEDVKSCAEFLSLSKARIEEYEKELEKMRNIIPFDQMTI |
AGLVD.FEKKFN..KVPVPEDKYTVQVDAEEKEDV.SCAE.LSLS.ARIEEY.KELEKM.NIIPFDQMTI | |
Retrocopy | AGLVDGFEKKFNVWKVPVPEDKYTVQVDAEEKEDVNSCAERLSLSNARIEEYKKELEKMKNIIPFDQMTI |
Parental | EDLNEVFPETKLDKKKYPYWSHKPIENL |
EDLNEVFP.TKLDKKKY.YW.HKPIENL | |
Retrocopy | EDLNEVFPQTKLDKKKYLYWPHKPIENL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |