RetrogeneDB ID: | retro_amel_1672 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193928.1:377547..377833(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5H | ||
Ensembl ID: | ENSAMEG00000009115 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d [Source:HGNC Symbol;Acc:845] |
Percent Identity: | 84.85 % |
Parental protein coverage: | 59.63 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | DWAYYKANVAKAGLVDDFEKKFNALKVPVPEDK-YTVQVDAEEKEDVK-SCAEFLSLSKARIEEYEKELE |
DWAYYKANVAKAGLV..FEKKFNALK.PVP.DK.YTV.VDAEEK.DVK.SCAEFLSLSKARIEE.EKELE | |
Retrocopy | DWAYYKANVAKAGLVEHFEKKFNALKFPVPQDK>YTVWVDAEEK-DVK<SCAEFLSLSKARIEECEKELE |
Parental | KMRNIIP-FDQMTIEDLNEVFPETKLDKK |
KM.NIIP..D.MTIE.LNEVFPETKLDK. | |
Retrocopy | KMKNIIP>NDHMTIEHLNEVFPETKLDKR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |