RetrogeneDB ID: | retro_amel_1823 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL194613.1:63656..63898(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5H | ||
Ensembl ID: | ENSAMEG00000009115 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d [Source:HGNC Symbol;Acc:845] |
Percent Identity: | 82.93 % |
Parental protein coverage: | 50.31 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | VPEDKYTVQVDAEEKEDVKSCAEFLSLSKARIEEYEKELEKMRNIIPFDQMTIEDL-NEVFPETKLDKKK |
.PEDKYTVQVD.E.KEDVKSCAEFLSLSKARIEE.EKE.EKM.N.I..DQMTIEDL..EVFPETKLDKKK | |
Retrocopy | LPEDKYTVQVDGEGKEDVKSCAEFLSLSKARIEENEKEPEKMKNVILCDQMTIEDL<VEVFPETKLDKKK |
Parental | YPYWSHKPIENL |
YPYW.HKP.E.L | |
Retrocopy | YPYWPHKPTEYL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |