RetrogeneDB ID: | retro_chof_707 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_137865:5582..6002(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSCHOG00000005782 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 79.29 % |
Parental protein coverage: | 56.91 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | KYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDSKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLAL |
K.LIPNA.Q.ESKVFYLKMKGDY.R.L.EVA.GD.K...V..SQQAYQEAFEISK.EMQP.HPI.LGLAL | |
Retrocopy | KVLIPNASQAESKVFYLKMKGDYYRNLAEVAAGDDKKGIVDQSQQAYQEAFEISKQEMQPMHPITLGLAL |
Parental | NFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTXXTSETQGDEREAGGG |
NFSVF.YEILNSPEK.CSLAKTAFDEAIAELDTL.EESYKD.T..MQLLR.NLT..TS.TQ.DE.EAG.G | |
Retrocopy | NFSVFCYEILNSPEKTCSLAKTAFDEAIAELDTLSEESYKDNTRLMQLLRGNLTLWTSDTQRDEAEAGEG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |