RetrogeneDB ID: | retro_chof_1975 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_441586:383..771(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSCHOG00000003412 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSCHOG00000005782 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 78.46 % |
Parental protein coverage: | 52.03 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | FYLKMKGDYFRYLSEVASGDSK-QTTVSNSQQAYQEAFEISK-KEMQPTHPIRLGLALNFSVFYYEILNS |
FYLKMK.DYFR..S.VASG.SK..TTV.NSQQAYQEAFEISK.K.MQPTHPI.L..ALNF.VFYYEILNS | |
Retrocopy | FYLKMKRDYFRFFSKVASGNSKTKTTVLNSQQAYQEAFEISK>KKMQPTHPIQLSRALNFTVFYYEILNS |
Parental | PEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTXXTSETQGDEREAGGGRD |
PEKACSL.K.AFDEAIAELD.LNE.SYK.STLIMQLLRDNLT..TSE.QG.E.E.G.G.. | |
Retrocopy | PEKACSLVKMAFDEAIAELDILNEKSYKNSTLIMQLLRDNLTLWTSENQGNEGETGEGEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |