RetrogeneDB ID: | retro_chof_1325 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_26256:9418..9847(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSCHOG00000005782 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 74.83 % |
Parental protein coverage: | 58.13 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | DKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDSKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLA |
D...IPNA.Q.ESKVFYLKMKGDY..YL.EVA.GD.K...V...QQ.YQEAFEI.KKEMQPT.PIRL.LA | |
Retrocopy | DVRVIPNASQAESKVFYLKMKGDYYCYLAEVAAGDDKKGIVDQPQQTYQEAFEINKKEMQPTYPIRLDLA |
Parental | LNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTXXTSETQGDEREAGG |
LNFSVFYYEILNSPEKACSL.KTAFD..IAELDTL.EES.KDSTLI.QLL.DNLT..TS.T.GD..EA.G | |
Retrocopy | LNFSVFYYEILNSPEKACSLTKTAFDDVIAELDTLSEESHKDSTLIVQLLSDNLTLWTSDT*GDKAEAEG |
Parental | GRD |
G.. | |
Retrocopy | GKN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |