RetrogeneDB ID: | retro_chof_326 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | GeneScaffold_7382:4287..4767(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSCHOG00000005782 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 81.88 % |
Parental protein coverage: | 65.04 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | REKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDSKQTTVSNSQQAYQEA |
RE.....L.D..NDVL.LL.K.LIPNA.Q.ESKVFYLKMKGDY.RYL..VA.GD.K...V..SQQAYQEA | |
Retrocopy | RERLRPKLRDFSNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAKVAAGDDKKGIVDQSQQAYQEA |
Parental | FEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLR |
FEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTL.EESYKDSTLIMQLLR | |
Retrocopy | FEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLR |
Parental | DNLTXXTSETQGDEREAGGG |
DNLT..TS.TQGDE.EAG.G | |
Retrocopy | DNLTLWTSDTQGDEAEAGEG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |