RetrogeneDB ID: | retro_chof_2669 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_95564:642..1182(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAZ | ||
Ensembl ID: | ENSCHOG00000002798 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:HGNC Symbol;Acc:12855] |
Percent Identity: | 83.33 % |
Parental protein coverage: | 78.6 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTE |
MDKNELVQK.KLA.QAE..DDMAACMKSVT.QGAELS...RNLLSVAYKNVVGA.RSSWR..SSIEQK.E | |
Retrocopy | MDKNELVQKTKLAKQAEHCDDMAACMKSVTKQGAELSCKDRNLLSVAYKNVVGAHRSSWRIISSIEQKIE |
Parental | GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKXX |
GAE.KQQMAREYRE..ET.LRDICNDVLSLLEKFLIPNASQAESKVFYL.MKGDYY.YLAEVAA.D.... | |
Retrocopy | GAEIKQQMAREYRENNETKLRDICNDVLSLLEKFLIPNASQAESKVFYLNMKGDYYHYLAEVAAVDNEMG |
Parental | IVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE |
.VD.SQQA.QEAFEIS.KEMQPTH..RL.LALNFSVFYYE | |
Retrocopy | TVDHSQQA*QEAFEISQKEMQPTHSSRLILALNFSVFYYE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |