RetrogeneDB ID: | retro_chof_1049 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_190135:503..1029(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSCHOG00000005782 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 66.29 % |
Parental protein coverage: | 71.54 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | QKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGD |
QK.E...KK.QM..EYR.KIE..L.DI.N.VL.L..K.L.PNA...ESKVF.LKMKGDY.RYL..VA.GD | |
Retrocopy | QKMEGVWKK*QMAQEYRKKIETKLRDIYNVVLSLWGKFLLPNALKAESKVFCLKMKGDYCRYLAKVAAGD |
Parental | SKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNF-SVFYYEILNSPEKACSLAKTAFDEAIAELDT |
.K...V..SQQ.YQEA.EI.KKEMQ...P..L.L.LN..SVFY..ILNSP.KACSLAKTAFDEAIA.LDT | |
Retrocopy | DKRGIVDQSQQEYQEACEIIKKEMQLMCPVQLRLDLNI<SVFYSDILNSPGKACSLAKTAFDEAIADLDT |
Parental | LNEE-SYKDSTLIMQLLRDNLTXXTSETQGDEREAGGG |
L.EE....DSTLIMQLLRDNLT...S.TQGD..EA.GG | |
Retrocopy | LSEE<AHEDSTLIMQLLRDNLTLWASDTQGDKAEAEGG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |