RetrogeneDB ID: | retro_mluc_953 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429785:4736471..4736833(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HMGB1 | ||
Ensembl ID: | ENSMLUG00000025979 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.31 % |
Parental protein coverage: | 56.28 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYE-KKAA |
PKGETKKKF.DPN...RPPSAFFLFCSEY.PKIKGEH.GLSIGD.AKKLGEMWN.TAA..KQP.E.KKAA | |
Retrocopy | PKGETKKKFMDPNVIQRPPSAFFLFCSEYHPKIKGEHRGLSIGDAAKKLGEMWNPTAAGNKQPVE<KKAA |
Parental | KLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDDEEEEEEE |
KLKEKY.K..AA...K..PDAAKKGV.KAEKSKKK.........DEE..... | |
Retrocopy | KLKEKYGKEPAAC*VKREPDAAKKGVIKAEKSKKKXXXXXXXDEDEEDDDHD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |