RetrogeneDB ID: | retro_itri_754 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393318.1:7715376..7715728(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000000443 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 82.5 % |
Parental protein coverage: | 60.41 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | KGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPK-IKGEHPGLSIGDV |
K.K.EDMA..DKA.YER..KTYIPPKGETK..FKDPNAPKRPPSA...FCSEYRPK.IKGEHPGLS.GDV | |
Retrocopy | KRKLEDMAETDKAPYERGIKTYIPPKGETKTNFKDPNAPKRPPSASS-FCSEYRPK>IKGEHPGLSTGDV |
Parental | AKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKKDIAAYRAKGKPDAAKKG |
AKKLGEMWN.TAADDKQPYEKKAA.LKEKY.KKD.AA..AKGKPDAA.KG | |
Retrocopy | AKKLGEMWNHTAADDKQPYEKKAAELKEKY-KKDTAAC*AKGKPDAANKG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |