RetrogeneDB ID: | retro_itri_1531 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393530.1:1816336..1816720(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSSTOG00000022301 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000000443 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 91.41 % |
Parental protein coverage: | 64.97 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR |
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFS.FSKKCSERWKTMS.KEKGKFED.AKADKA. | |
Retrocopy | MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSAFSKKCSERWKTMSIKEKGKFEDLAKADKAY |
Parental | YEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKK |
YEREMK.YIPPKGETKKKFKDPNAPKRPP..FFLFCSE.RP.IKGEHPGL.IGDVAK. | |
Retrocopy | YEREMKIYIPPKGETKKKFKDPNAPKRPPLTFFLFCSELRPQIKGEHPGLPIGDVAKE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |