RetrogeneDB ID: | retro_itri_584 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393303.1:3655246..3655582(-) | ||
Located in intron of: | ENSSTOG00000002811 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000000443 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 68.64 % |
Parental protein coverage: | 58.38 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEF-SKKCSERWKTMSAKEKGKF-EDMAKADK |
.G.G.PK.PRGKMSS..FFVQTCREE.KKK.PDA.V.FSEF.S.KCSE..KT.SA..KGK..E.MAK.DK | |
Retrocopy | VGIGHPKEPRGKMSSDTFFVQTCREENKKKLPDAAVSFSEF<SMKCSESPKTLSA--KGKE<ENMAKVDK |
Parental | ARYEREMKTYIPPKGETKKKFKDPNA-PKRPPSAFFLFCSEYRPKIKG |
.RYEREMKT.IPP.GE.KK..KD.NA...RPP.A.FL.CSEYRP...G | |
Retrocopy | DRYEREMKTSIPPAGESKKEIKDLNA<TERPPLALFLSCSEYRPLMEG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |