RetrogeneDB ID: | retro_mluc_1615 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429872:1289288..1289694(-) | ||
Located in intron of: | ENSMLUG00000005512 | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000025162 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HMGB1 | ||
Ensembl ID: | ENSMLUG00000025979 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 79.41 % |
Parental protein coverage: | 62.79 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | KCSERWKTMSAKEKGKFEDMAKADKA-RYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPK |
KCSERWKTMS...K.......K......Y.REMK.YIPPKGETKKKFKDPNAPKRPPSAFFL.CSEY.PK | |
Retrocopy | KCSERWKTMSLRRKENLKTRQKWTRP>LYRREMKIYIPPKGETKKKFKDPNAPKRPPSAFFLICSEYHPK |
Parental | IKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA |
IKG.HPGLS.GD.AKKLGEMWNNTAADDKQP.EKKAAKLKEKYEKDIAA..AKGKPDAAK..VVKA | |
Retrocopy | IKGKHPGLSTGDIAKKLGEMWNNTAADDKQPHEKKAAKLKEKYEKDIAADQAKGKPDAAKNRVVKA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |