RetrogeneDB ID: | retro_itri_127 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393326.1:6260245..6260893(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSSTOG00000027122 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000000443 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 96.39 % |
Parental protein coverage: | 98.48 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR |
MGK.DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR | |
Retrocopy | MGKADPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR |
Parental | YEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADD |
YEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLF..EYRP.IKGEHPGLSIGDVAKKLGEMWNNTAADD | |
Retrocopy | YEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFYPEYRPQIKGEHPGLSIGDVAKKLGEMWNNTAADD |
Parental | KQPYEKKAAKLKEKYEKKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDVEN |
KQPYEKKAAKLKEKYE.KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED.E. | |
Retrocopy | KQPYEKKAAKLKEKYE-KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |