RetrogeneDB ID: | retro_itri_553 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393301.1:3698706..3699087(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSSTOG00000026635 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000000443 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 89.84 % |
Parental protein coverage: | 64.97 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR |
MGKGDPKKPRGKMSSYAFFVQT..EEHKKKHP.ASVNFSEFSKKCSERWKTMSAKEKGKF.DMAK.DKAR | |
Retrocopy | MGKGDPKKPRGKMSSYAFFVQT-KEEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFVDMAKVDKAR |
Parental | YEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKK |
.EREMKTY.PPKGETKK.FKDP.A.KRPPSAFFLFCSEYRP..KGEHPGLS.GDVAKK | |
Retrocopy | NEREMKTYTPPKGETKKEFKDPSASKRPPSAFFLFCSEYRPQTKGEHPGLSTGDVAKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |