RetrogeneDB ID: | retro_itri_792 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393323.1:4275483..4275942(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSSTOG00000025269 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000000443 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 90.26 % |
Parental protein coverage: | 78.17 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR |
MGKGDPKK.RGKMSSYAFF.QTC.EEH.KKHPD.SVNFSEFSKKCSERWKTM.AKEKGKFE.MA.ADKA. | |
Retrocopy | MGKGDPKKLRGKMSSYAFFMQTCWEEHQKKHPDTSVNFSEFSKKCSERWKTMCAKEKGKFEEMANADKAC |
Parental | YEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADD |
YEREMKTYIPPKG.TKKKFKDPNAPKRPPSA.FLFCSEY.P.IK.EHPGLSIGDVAKKLGEMWNNTAAD. | |
Retrocopy | YEREMKTYIPPKGATKKKFKDPNAPKRPPSA-FLFCSEYCPQIKAEHPGLSIGDVAKKLGEMWNNTAADG |
Parental | KQPYEKKAAKLKEK |
KQPYEKKAAKLKEK | |
Retrocopy | KQPYEKKAAKLKEK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |