RetrogeneDB ID: | retro_itri_1852 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH394120.1:33993..34377(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000000443 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 90.62 % |
Parental protein coverage: | 64.97 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR |
MGKGDPKKPRGKMSSYAFFVQTC.EEHKKKHP.ASVNFSEFSKKCS.RWKTMSAKEKGKF.DMAK.DKAR | |
Retrocopy | MGKGDPKKPRGKMSSYAFFVQTCGEEHKKKHPEASVNFSEFSKKCSDRWKTMSAKEKGKFVDMAKVDKAR |
Parental | YEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKK |
.EREMK.Y.PPKGET.KKFKD.NAPKRPPSAFFLFCSEY.PKIKGEHPGLS.GDVAKK | |
Retrocopy | NEREMKSYTPPKGETEKKFKDSNAPKRPPSAFFLFCSEYHPKIKGEHPGLSTGDVAKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |