RetrogeneDB ID: | retro_itri_233 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393281.1:746045..746421(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000000443 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 67.19 % |
Parental protein coverage: | 64.47 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGET |
YAFFVQ.C.EEHKKKHPDASVNFSEFSKKCSE........E..K.....K..........KT..PPKGET | |
Retrocopy | YAFFVQACWEEHKKKHPDASVNFSEFSKKCSEMEDHVC*RER-KI*SQGKGGQGPL*KRLKTCTPPKGET |
Parental | KKKFKDPNAPKR-PPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ |
KKKFK.PN.PKR.PP.AF.LFCSEY.PKI.GEHPG..IGDVAKKLGE.W..TAADDK. | |
Retrocopy | KKKFKNPNIPKR>PPAAF-LFCSEYHPKIQGEHPGQCIGDVAKKLGERWIPTAADDKE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |