Parental gene: | PTP4A1, ENSCPOG00000025759 |
Aliases: | None |
Description: | None |
Organism: | Guinea Pig (Cavia porcellus) |
Coordinates: | scaffold_0:82587918..82590483(-) |
Library | Parental gene expression (RPM) |
---|---|
SRP017611_liver | 21 .28 RPM |
SRP017611_kidney | 23 .45 RPM |
SRP017611_brain | 27 .44 RPM |
SRP040447_lung | 27 .29 RPM |
SRP040447_skeletal_muscle | 37 .03 RPM |
Species | Parental gene accession | Homology type | Retrogenes number | |
---|---|---|---|---|
Bos taurus | ENSBTAG00000002275 | ortholog_one2one | 3 retrogenes | |
Echinops telfairi | ENSETEG00000008183 | ortholog_one2one | 6 retrogenes | |
Latimeria chalumnae | ENSLACG00000007183 | ortholog_one2many | 1 retrogene | |
Loxodonta africana | ENSLAFG00000006572 | ortholog_one2one | 8 retrogenes | |
Myotis lucifugus | ENSMLUG00000001162 | ortholog_one2many | 1 retrogene | |
Macaca mulatta | ENSMMUG00000002777 | possible_ortholog | 1 retrogene | |
Monodelphis domestica | ENSMODG00000018701 | ortholog_one2many | 5 retrogenes | |
Nomascus leucogenys | ENSNLEG00000000440 | ortholog_one2one | 6 retrogenes | |
Oryctolagus cuniculus | ENSOCUG00000006311 | possible_ortholog | 4 retrogenes | |
Ochotona princeps | ENSOPRG00000004938 | possible_ortholog | 4 retrogenes | |
Pongo abelii | ENSPPYG00000016743 | ortholog_one2one | 5 retrogenes | |
Rattus norvegicus | ENSRNOG00000011771 | possible_ortholog | 4 retrogenes | |
Rattus norvegicus | ENSRNOG00000046370 | possible_ortholog | 4 retrogenes | |
Tupaia belangeri | ENSTBEG00000009956 | possible_ortholog | 14 retrogenes | |
Tursiops truncatus | ENSTTRG00000004129 | ortholog_one2one | 6 retrogenes | |
Vicugna pacos | ENSVPAG00000004277 | possible_ortholog | 9 retrogenes |
# | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
---|---|---|---|---|---|---|
1. | retro_cpor_58 | 83.24 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
2. | retro_cpor_552 | 62.69 | 75.72 | Please wait, loading | Please wait, loading | Please wait, loading |
3. | retro_cpor_1137 | 55.37 | 69.36 | Please wait, loading | Please wait, loading | Please wait, loading |
4. | retro_cpor_1233 | 55.45 | 57.23 | Please wait, loading | Please wait, loading | Please wait, loading |
5. | retro_cpor_1392 | 59.30 | 96.53 | Please wait, loading | Please wait, loading | Please wait, loading |