RetrogeneDB ID: | retro_tbel_1216 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_4126:486055..486451(+) | ||
Located in intron of: | ENSTBEG00000000191 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000009956 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.64 % |
Parental protein coverage: | 76.3 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | VTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFR-EEPGCCIAVHCVAGLGR |
V.TIVRVCEAT.DTTLVEKEG..VLDW.FDDGAPPSNQI.D..L.LVK.KF..EEPGCCI....VAGL.. | |
Retrocopy | VSTIVRVCEAT*DTTLVEKEGTQVLDWLFDDGAPPSNQIADNGLGLVKMKFV<EEPGCCIVTYSVAGLRT |
Parental | APVLVALALIEGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKM-RLRFKDSNGHRNNCCVQ |
.PVLV.LAL.EGGMKYEDAV.FIRQK...A.NSKQLL.LEK...KM..L...DS.GH.NNCC.Q | |
Retrocopy | VPVLVDLALTEGGMKYEDAVHFIRQKQY*AVNSKQLL*LEKHSSKM>GLHLQDSSGHTNNCCIQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |