RetrogeneDB ID: | retro_tbel_4123 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_68022:4496..5014(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000009956 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 90.8 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPF |
MA.MN.P.PVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRV.EAT.DTTLVEKEGIHVLDWPF | |
Retrocopy | MALMNCPVPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVYEAT*DTTLVEKEGIHVLDWPF |
Parental | DDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFI-RQKRRG |
DDG.PPSNQIVDDWL.LVKIK..EEPGCCIAVHCV.GLGRAPVLVALALIEGG.KYEDAVQFI.RQKR.G | |
Retrocopy | DDGVPPSNQIVDDWLRLVKIKLHEEPGCCIAVHCVTGLGRAPVLVALALIEGGIKYEDAVQFI<RQKRLG |
Parental | AFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCVQ |
AFNSKQLLYLEKYRPKM.L.FKDSNGHRNNCC.Q | |
Retrocopy | AFNSKQLLYLEKYRPKMQLCFKDSNGHRNNCCLQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |