RetrogeneDB ID: | retro_nleu_169 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397261.1:22251502..22251775(+) | ||
Located in intron of: | ENSNLEG00000015172 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PTP4A1 | ||
Ensembl ID: | ENSNLEG00000000440 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 50.54 % |
Parental protein coverage: | 52.6 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | VDDWLSLVK-IKFREEPGCCIAVHCVAGLGRAPVLV-ALALIEGGMKYEDAVQFIRQKRRGAFNSKQLLY |
VDDWL..VK..KF.EE..CCI...C....G....LV..L.....GMKYEDAV.FIRQK..G...SKQ... | |
Retrocopy | VDDWLCFVK<MKFLEEASCCIKYYCHHVAGFGRALV>SLSKH*SGMKYEDAVKFIRQK*NGNVRSKQFFS |
Parental | LEKYRPKMRLRFKDSNGHRNNCC |
L..Y.P.M.L.F.D....RNN.C | |
Retrocopy | LKQYCPTMQLHFLDTSSQRNNSC |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |