Parental gene: | PTP4A1, ENSBTAG00000002275 |
Aliases: | None |
Description: | protein tyrosine phosphatase type IVA 1 [Source:RefSeq peptide;Acc:NP_001193053] |
Organism: | Cow (Bos taurus) |
Coordinates: | 9:512138..516069(+) |
Library | Parental gene expression (RPM) |
---|---|
SRP017611_brain | 35 .26 RPM |
SRP017611_kidney | 38 .05 RPM |
SRP017611_liver | 38 .28 RPM |
ERP005899_muscle | 28 .29 RPM |
ERP005899_liver | 58 .47 RPM |
SRP030211_testis | 69 .82 RPM |
Species | Parental gene accession | Homology type | Retrogenes number | |
---|---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000002438 | ortholog_one2one | 3 retrogenes | |
Bos taurus | ENSBTAG00000039121 | within_species_paralog | 1 retrogene | |
Bos taurus | ENSBTAG00000046467 | within_species_paralog | 1 retrogene | |
Canis familiaris | ENSCAFG00000002490 | ortholog_one2one | 3 retrogenes | |
Callithrix jacchus | ENSCJAG00000001743 | ortholog_one2one | 3 retrogenes | |
Cavia porcellus | ENSCPOG00000025759 | ortholog_one2one | 5 retrogenes | |
Dipodomys ordii | ENSDORG00000009960 | ortholog_one2one | 6 retrogenes | |
Equus caballus | ENSECAG00000022483 | ortholog_one2one | 6 retrogenes | |
Erinaceus europaeus | ENSEEUG00000006477 | ortholog_one2one | 3 retrogenes | |
Echinops telfairi | ENSETEG00000008183 | ortholog_one2one | 6 retrogenes | |
Felis catus | ENSFCAG00000001199 | ortholog_one2one | 3 retrogenes | |
Homo sapiens | ENSG00000112245 | ortholog_one2one | 5 retrogenes | |
Gorilla gorilla | ENSGGOG00000022521 | ortholog_one2one | 7 retrogenes | |
Latimeria chalumnae | ENSLACG00000007183 | ortholog_one2one | 1 retrogene | |
Loxodonta africana | ENSLAFG00000006572 | ortholog_one2one | 8 retrogenes | |
Myotis lucifugus | ENSMLUG00000001162 | ortholog_one2many | 1 retrogene | |
Macaca mulatta | ENSMMUG00000002777 | possible_ortholog | 1 retrogene | |
Monodelphis domestica | ENSMODG00000018701 | ortholog_one2one | 5 retrogenes | |
Mustela putorius furo | ENSMPUG00000003118 | ortholog_one2one | 1 retrogene | |
Mus musculus | ENSMUSG00000026064 | ortholog_one2one | 10 retrogenes | |
Nomascus leucogenys | ENSNLEG00000000440 | ortholog_one2one | 6 retrogenes | |
Oryctolagus cuniculus | ENSOCUG00000006311 | ortholog_one2many | 4 retrogenes | |
Pongo abelii | ENSPPYG00000016743 | ortholog_one2one | 5 retrogenes | |
Pan troglodytes | ENSPTRG00000018314 | ortholog_one2one | 4 retrogenes | |
Pteropus vampyrus | ENSPVAG00000015225 | ortholog_one2one | 2 retrogenes | |
Rattus norvegicus | ENSRNOG00000011771 | ortholog_one2many | 4 retrogenes | |
Rattus norvegicus | ENSRNOG00000046370 | ortholog_one2many | 4 retrogenes | |
Tupaia belangeri | ENSTBEG00000009956 | ortholog_one2many | 14 retrogenes | |
Tarsius syrichta | ENSTSYG00000004632 | ortholog_one2one | 2 retrogenes | |
Tursiops truncatus | ENSTTRG00000004129 | ortholog_one2one | 6 retrogenes |
# | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
---|---|---|---|---|---|---|
1. | retro_btau_859 | 78.95 | 75.72 | Please wait, loading | Please wait, loading | Please wait, loading |
2. | retro_btau_1051 | 73.39 | 71.10 | Please wait, loading | Please wait, loading | Please wait, loading |
3. | retro_btau_1186 | 88.44 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |