RetrogeneDB ID: | retro_ttru_34 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_447:523517..524015(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSTTRG00000010531 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PTP4A1 | ||
Ensembl ID: | ENSTTRG00000004129 | ||
Aliases: | None | ||
Description: | protein tyrosine phosphatase type IVA, member 1 [Source:HGNC Symbol;Acc:9634] |
Percent Identity: | 86.96 % |
Parental protein coverage: | 53.18 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | VEITYKNMRFLITHNPTNATLNKFIEELKKYGVTTVVRVCEATYDTSLVEKEGIHVLDWPFDDGAPPSNQ |
VE.TYKNMRFLITHNPT..TL.KFIE.LKK.GVTT..R.CEATYDT.LVE.EGIHVLDWPFDDGAPPSNQ | |
Retrocopy | VEVTYKNMRFLITHNPTHVTLSKFIEDLKKCGVTTIGRLCEATYDTTLVEREGIHVLDWPFDDGAPPSNQ |
Parental | IVDDWLSLVKIKFREDPGCCIA |
IVDDWLSLVKIKFREDPGCC.A | |
Retrocopy | IVDDWLSLVKIKFREDPGCCVA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |