RetrogeneDB ID: | retro_tbel_2167 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_103196:511..1002(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000009956 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 61.08 % |
Parental protein coverage: | 94.22 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | PAPVEVTYKNMRFLITHNPTNATLNKFIEELK-KYGVTTIVRVCEATYDTTLVEKEGIHVL-DWPFDD-G |
P.PVEVTY...RF...HN..N.TLNKF....K.KYG.TTIVRVCEATYDTTL.EKEGIHVL.DWP.D..G | |
Retrocopy | PTPVEVTYESLRFFVIHNSINTTLNKFVGDFK<KYGLTTIVRVCEATYDTTLMEKEGIHVL<DWPCDYYG |
Parental | APPSNQIVDDWLS-LVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQKRRGAFN |
..P.N.I.DD.LS.L.K..F...........C...L.RAP..VALALIEG.M.YED....IR.K..GAFN | |
Retrocopy | V*P*NWIIDDRLS>LYKFSFMKNLFSGCWSLCCRLLERAPMIVALALIEGRMRYEDTLKLIRRKWHGAFN |
Parental | SKQLLYLEKYRPKMRLRFKDSNGHRNN |
SKQLLYLEKY.P.M.L.FKD..G.RN. | |
Retrocopy | SKQLLYLEKYCPNMQLCFKDFSGCRNS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |