RetrogeneDB ID: | retro_nleu_893 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397275.1:27191806..27192316(-) | ||
Located in intron of: | ENSNLEG00000015448 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PTP4A1 | ||
Ensembl ID: | ENSNLEG00000000440 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 86.47 % |
Parental protein coverage: | 98.27 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTALVEKEGIHVLDWPFDDG |
MN.PAPV.VTYKNMRF.ITHNPTN.TLNKFIEELKKYG.TTIVRVCEATYDT..VEKEGIHVL.WPF.DG | |
Retrocopy | MNHPAPVKVTYKNMRFPITHNPTNVTLNKFIEELKKYGATTIVRVCEATYDTGFVEKEGIHVLNWPFGDG |
Parental | APPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQKRRGAFNS |
APPS.QIV.DWL..VKIKFRE..GC.IAVHC..GLGRAPVLVALALIEGGMK.EDAVQFI.QKRRGAF.S | |
Retrocopy | APPSSQIVADWLHFVKIKFREKSGCYIAVHCIVGLGRAPVLVALALIEGGMKHEDAVQFIGQKRRGAFKS |
Parental | KQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ |
KQLLYLEKY.PKMRLRFKDSNGH.NNCCIQ | |
Retrocopy | KQLLYLEKYHPKMRLRFKDSNGHINNCCIQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |