RetrogeneDB ID: | retro_lafr_7 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_39:3687366..3687879(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSLAFG00000027289 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PTP4A1 | ||
Ensembl ID: | ENSLAFG00000006572 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 81.03 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTALVEKEGIHVLDWPF |
MA.M.RPAPVE.TY.NMRFLI.HNPTNA.LNKF..ELKK.GVTTIVRVCEATY.TA..EKEGI.VLDWPF | |
Retrocopy | MAGMIRPAPVEITYRNMRFLIAHNPTNASLNKFLQELKKNGVTTIVRVCEATYNTAILEKEGIQVLDWPF |
Parental | DDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGSRAPVLVALALIEGGMKYEDAVQFIRQKRRG |
DDG.PPS.QIV..WL.LVK.KFRE.PGCCIAVHCV.GLG.R.PVLVALALIEGGMKYEDAVQFIRQKRRG | |
Retrocopy | DDGTPPSSQIVEKWLNLVKMKFRENPGCCIAVHCVCGLG-RGPVLVALALIEGGMKYEDAVQFIRQKRRG |
Parental | AFNSKQLLYLEKYRPKMRLRFKESNGHRNNCCIQ |
AFNSKQLLYLE.YRPKM.LRF......RNNC..Q | |
Retrocopy | AFNSKQLLYLENYRPKMCLRFRNT---RNNCFLQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |